Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BE963_RS02875 | Not Available | Negative | 29524 - 29757 | 8563.17 |
| Hypothetical protein | BE963_RS02880 | Not Available | Negative | 29825 - 30166 | 12825.6 |
| Hypothetical protein | BE963_RS02885 | Not Available | Negative | 30130 - 30330 | 7717.47 |
| Regulatory protein | BE963_RS02890 | Not Available | Negative | 30338 - 30847 | 18210.0 |
| Rha family transcriptional regulator | BE963_RS02895 | Not Available | Negative | 30880 - 31122 | 9242.27 |
| Repressor protein ci | BE963_RS02900 | Not Available | Positive | 31242 - 31874 | 22743.3 |
| Integrase | BE963_RS02905 | Not Available | Positive | 31876 - 32889 | 38117.3 |
| Hypothetical protein | BE963_RS02910 | Not Available | Positive | 32904 - 34160 | 48339.1 |
| Attr | Not Available | Not Available | Positive | 35373 - 35385 | Not Available |
| Attl | Not Available | Not Available | Positive | 3334651 - 3334671 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





