Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein ygdr | BE963_RS03860 | Not Available | Positive | 229993 - 230211 | 7877.35 |
| nadp(h)-dependent aldo-keto reductase | BE963_RS03865 | Not Available | Positive | 230319 - 231359 | 38501.7 |
| lysophospholipid transporter lplt | BE963_RS03870 | Not Available | Negative | 231391 - 232584 | 41599.1 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | BE963_RS03875 | Not Available | Negative | 232577 - 234736 | 80758.8 |
| hth-type transcriptional regulator galr | BE963_RS03880 | Not Available | Positive | 235322 - 236353 | 37096.2 |
| diaminopimelate decarboxylase | BE963_RS03885 | Not Available | Negative | 236360 - 237622 | 46178.1 |
| dna-binding transcriptional regulator lysr | BE963_RS03890 | Not Available | Positive | 237744 - 238679 | 34471.7 |
| amino acid racemase | BE963_RS03895 | Not Available | Negative | 238666 - 239358 | 25295.5 |
| arabinose-proton symporter arae | BE963_RS03900 | Not Available | Negative | 239487 - 240905 | 51731.7 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | BE963_RS03905 | Not Available | Negative | 241220 - 241981 | 27056.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





