Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid-partitioning protein sopa | BE963_RS00145 | Not Available | Negative | 20580 - 21746 | 43662.6 |
| replication initiation protein repe | BE963_RS00150 | Not Available | Negative | 22334 - 23089 | 29360.2 |
| site-specific integrase | BE963_RS00155 | Not Available | Negative | 23863 - 24669 | 29602.2 |
| type ii toxin-antitoxin system toxin ccdb | BE963_RS00160 | Not Available | Negative | 24670 - 24975 | 11707.2 |
| type ii toxin-antitoxin system antitoxin ccda | BE963_RS00165 | Not Available | Negative | 24977 - 25195 | 8372.8 |
| smods domain-containing nucleotidyltransferase | BE963_RS00170 | Not Available | Positive | 25903 - 26898 | 37838.7 |
| s-4tm family putative pore-forming effector | BE963_RS00175 | Not Available | Positive | 26902 - 27834 | 36171.2 |
| is4-like element isvsa5 family transposase | BE963_RS00185 | Not Available | Positive | 28127 - 29215 | 40391.7 |
| hypothetical protein | BE963_RS00190 | Not Available | Positive | 29217 - 30086 | 33466.9 |
| aaa family atpase | BE963_RS00195 | Not Available | Negative | 30143 - 31708 | 58755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





