Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | BE963_RS28270 | Not Available | Positive | 5048768 - 5050054 | 48047.2 |
| nucleotide exchange factor grpe | BE963_RS28275 | Not Available | Negative | 5050109 - 5050702 | 21813.1 |
| nad(+) kinase | BE963_RS28285 | Not Available | Positive | 5050825 - 5051703 | 32568.3 |
| dna repair protein recn | BE963_RS28290 | Not Available | Positive | 5051789 - 5053450 | 61354.1 |
| outer membrane protein assembly factor bame | BE963_RS28295 | Not Available | Positive | 5053599 - 5053940 | 12302.8 |
| rnfh family protein | BE963_RS28300 | Not Available | Negative | 5054002 - 5054292 | 10790.0 |
| type ii toxin-antitoxin system toxin rata | BE963_RS28305 | Not Available | Negative | 5054282 - 5054719 | 16220.6 |
| ssra-binding protein smpb | BE963_RS28310 | Not Available | Positive | 5054890 - 5055372 | 18270.1 |
| is4-like element isvsa5 family transposase | BE963_RS00005 | Not Available | Negative | 19 - 1269 | 46220.9 |
| eal domain-containing protein | BE963_RS00015 | Not Available | Negative | 1344 - 2012 | 24467.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





