Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 5029615 - 5031156 | Not Available |
| atp-dependent chaperone clpb | BE963_RS28175 | Not Available | Negative | 5031597 - 5034170 | 95590.8 |
| purine nucleoside phosphorylase yfih | BE963_RS28180 | Not Available | Negative | 5034300 - 5035031 | 26343.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | BE963_RS28185 | Not Available | Negative | 5035028 - 5036008 | 37109.8 |
| outer membrane protein assembly factor bamd | BE963_RS28190 | Not Available | Positive | 5036143 - 5036880 | 27830.9 |
| ribosome-associated translation inhibitor raia | BE963_RS28200 | Not Available | Positive | 5037150 - 5037491 | 12785.3 |
| phea operon leader peptide phel | BE963_RS28915 | Not Available | Positive | 5037595 - 5037642 | 1912.35 |
| bifunctional chorismate mutase/prephenate dehydratase | BE963_RS28205 | Not Available | Positive | 5037742 - 5038902 | 43099.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | BE963_RS28210 | Not Available | Negative | 5038945 - 5040066 | 42009.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | BE963_RS28215 | Not Available | Negative | 5040077 - 5041147 | 38834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





