Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma-e factor rsea | BE963_RS28065 | Not Available | Negative | 5008959 - 5009609 | 24322.8 |
| rna polymerase sigma factor rpoe | BE963_RS28070 | Not Available | Negative | 5009642 - 5010217 | 21697.0 |
| rpoe leader peptide rsed | BE963_RS29310 | Not Available | Negative | 5010214 - 5010369 | 6229.83 |
| l-aspartate oxidase | BE963_RS28075 | Not Available | Positive | 5010625 - 5012247 | 60145.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | BE963_RS28080 | Not Available | Negative | 5012232 - 5012969 | 27270.5 |
| atp-dependent rna helicase srmb | BE963_RS28085 | Not Available | Positive | 5013101 - 5014435 | 49901.0 |
| lysr family transcriptional regulator | BE963_RS28090 | Not Available | Negative | 5014468 - 5015349 | 33312.4 |
| cysteine/o-acetylserine transporter | BE963_RS28095 | Not Available | Positive | 5015452 - 5016039 | 21260.6 |
| autonomous glycyl radical cofactor grca | BE963_RS28100 | Not Available | Negative | 5016101 - 5016484 | 14269.0 |
| uracil-dna glycosylase | BE963_RS28105 | Not Available | Positive | 5016789 - 5017478 | 25709.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





