Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | BE963_RS27535 | Not Available | Positive | 4887273 - 4887845 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | BE963_RS27540 | Not Available | Positive | 4887845 - 4888315 | 17634.9 |
| hydrogenase 4 subunit hyfa | BE963_RS27545 | Not Available | Positive | 4888568 - 4889185 | 22219.6 |
| hydrogenase 4 subunit b | BE963_RS27550 | Not Available | Positive | 4889185 - 4891203 | 72687.6 |
| hydrogenase 4 subunit hyfc | BE963_RS27555 | Not Available | Positive | 4891214 - 4892161 | 34271.2 |
| hydrogenase 4 subunit hyfd | BE963_RS27560 | Not Available | Positive | 4892178 - 4893617 | 51789.7 |
| hydrogenase 4 membrane subunit | BE963_RS27565 | Not Available | Positive | 4893629 - 4894279 | 23405.1 |
| hydrogenase 4 subunit f | BE963_RS27570 | Not Available | Positive | 4894284 - 4895864 | 56520.4 |
| hydrogenase 4 catalytic subunit hyfg | BE963_RS27575 | Not Available | Positive | 4895854 - 4897569 | 65072.1 |
| hydrogenase 4 subunit h | BE963_RS27580 | Not Available | Positive | 4897579 - 4898124 | 20144.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





