Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ypfm | BE963_RS27485 | Not Available | Negative | 4878204 - 4878263 | 2408.02 |
| arsc family reductase | BE963_RS27490 | Not Available | Positive | 4878644 - 4879000 | 13557.3 |
| succinyl-diaminopimelate desuccinylase | BE963_RS27495 | Not Available | Positive | 4879004 - 4880131 | 41255.4 |
| ypfn family protein | BE963_RS27500 | Not Available | Positive | 4880159 - 4880359 | 8071.78 |
| esterase | BE963_RS27505 | Not Available | Negative | 4880440 - 4881138 | 24800.4 |
| trna cytosine(34) acetyltransferase tmca | BE963_RS27510 | Not Available | Negative | 4881212 - 4883227 | 74880.6 |
| neutral zinc metallopeptidase | BE963_RS27515 | Not Available | Negative | 4883242 - 4884105 | 31476.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BE963_RS27520 | Not Available | Negative | 4884273 - 4884986 | 26996.5 |
| outer membrane protein assembly factor bamc | BE963_RS27525 | Not Available | Negative | 4885199 - 4886233 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BE963_RS27530 | Not Available | Negative | 4886250 - 4887128 | 31285.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





