Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ypdk | BE963_RS27080 | Not Available | Positive | 4797990 - 4798061 | 2704.57 |
| alanine transaminase | BE963_RS27085 | Not Available | Negative | 4798126 - 4799364 | 46218.8 |
| two-component system sensor histidine kinase ypda | BE963_RS27090 | Not Available | Positive | 4799741 - 4801438 | 62635.2 |
| two-component system response regulator ypdb | BE963_RS27095 | Not Available | Positive | 4801453 - 4802187 | 28722.6 |
| arac family transcriptional regulator | BE963_RS27100 | Not Available | Positive | 4802200 - 4803057 | 32460.6 |
| phosphoenolpyruvate--protein phosphotransferase | BE963_RS27105 | Not Available | Negative | 4803060 - 4805555 | 92071.2 |
| aminopeptidase | BE963_RS27110 | Not Available | Negative | 4805580 - 4806617 | 37455.2 |
| aminopeptidase | BE963_RS27115 | Not Available | Negative | 4806617 - 4807702 | 39645.3 |
| pts fructose transporter subunit iic | BE963_RS27120 | Not Available | Negative | 4807717 - 4808964 | 43941.0 |
| pts fructose transporter subunit iib | BE963_RS27125 | Not Available | Negative | 4808986 - 4809312 | 11736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





