Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | BE963_RS26980 | Not Available | Negative | 4765957 - 4766487 | 19703.9 |
| phase-variable autotransporter adhesin upae | BE963_RS26985 | Not Available | Negative | 4766535 - 4774448 | 269913.0 |
| helix-turn-helix transcriptional regulator | BE963_RS26990 | Not Available | Negative | 4774473 - 4775093 | 23984.3 |
| tyrosine-type dna invertase ipua | BE963_RS26995 | Not Available | Negative | 4775411 - 4776040 | 24197.4 |
| tyrosine-type dna invertase ipub | BE963_RS27000 | Not Available | Positive | 4776789 - 4777358 | 22043.1 |
| dna-binding transcriptional regulator dsdc | BE963_RS27005 | Not Available | Negative | 4777755 - 4778702 | 35931.8 |
| d-serine transporter dsdx | BE963_RS27010 | Not Available | Positive | 4778920 - 4780257 | 47126.1 |
| d-serine ammonia-lyase | BE963_RS27015 | Not Available | Positive | 4780275 - 4781603 | 47917.3 |
| multidrug efflux mfs transporter permease subunit emry | BE963_RS27020 | Not Available | Negative | 4781711 - 4783249 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | BE963_RS27025 | Not Available | Negative | 4783249 - 4784412 | 42587.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





