Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | BE963_RS26815 | Not Available | Negative | 4733724 - 4734536 | 30386.2 |
| aspartate-semialdehyde dehydrogenase | BE963_RS26820 | Not Available | Negative | 4734536 - 4735549 | 36324.1 |
| 4-phosphoerythronate dehydrogenase pdxb | BE963_RS26825 | Not Available | Negative | 4735615 - 4736751 | 41293.9 |
| flagella biosynthesis regulator flk | BE963_RS26830 | Not Available | Positive | 4736850 - 4737845 | 36596.3 |
| arabinose transporter | BE963_RS26835 | Not Available | Negative | 4737842 - 4739020 | 40453.7 |
| beta-ketoacyl-acp synthase i | BE963_RS26845 | Not Available | Negative | 4739295 - 4740515 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | BE963_RS26850 | Not Available | Positive | 4740674 - 4742680 | 74245.9 |
| yfcl family protein | BE963_RS26855 | Not Available | Negative | 4742801 - 4743079 | 10000.6 |
| hypothetical protein | BE963_RS26860 | Not Available | Negative | 4743113 - 4743650 | 19151.5 |
| sulfite exporter taue/safe family protein | BE963_RS26865 | Not Available | Negative | 4743650 - 4744459 | 28645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





