Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BE963_RS26460 | Not Available | Negative | 4660494 - 4661768 | 45486.2 |
| rna-guided endonuclease insq/tnpb family protein | BE963_RS26465 | Not Available | Negative | 4661765 - 4662973 | 45715.9 |
| hypothetical protein | BE963_RS26470 | Not Available | Positive | 4662981 - 4663406 | 16505.0 |
| nicotinamide mononucleotide deamidase-related protein yfay | BE963_RS26475 | Not Available | Negative | 4663456 - 4664664 | 44446.5 |
| yfaz family outer membrane protein | BE963_RS26480 | Not Available | Negative | 4664764 - 4665306 | 18596.8 |
| nucleoside triphosphatase nudi | BE963_RS26485 | Not Available | Positive | 4665585 - 4666010 | 16359.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | BE963_RS26490 | Not Available | Negative | 4666049 - 4666651 | 22291.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | BE963_RS26495 | Not Available | Positive | 4666959 - 4668098 | 41655.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | BE963_RS26500 | Not Available | Positive | 4668102 - 4669070 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | BE963_RS26505 | Not Available | Positive | 4669070 - 4671052 | 74239.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





