Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | BE963_RS26360 | Not Available | Negative | 4632946 - 4634634 | 62617.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | BE963_RS26365 | Not Available | Negative | 4634783 - 4637410 | 96994.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | BE963_RS26370 | Not Available | Positive | 4637557 - 4638279 | 26575.0 |
| aida-i family autotransporter adhesin yfal/ehac | BE963_RS26375 | Not Available | Negative | 4638406 - 4642134 | 130293.0 |
| protein ypab | BE963_RS29995 | Not Available | Negative | 4642559 - 4642702 | 5295.47 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | BE963_RS26385 | Not Available | Positive | 4642830 - 4645115 | 85722.9 |
| class ia ribonucleoside-diphosphate reductase subunit beta | BE963_RS26390 | Not Available | Positive | 4645349 - 4646479 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | BE963_RS26395 | Not Available | Positive | 4646479 - 4646733 | 9275.25 |
| lipopolysaccharide kinase inaa | BE963_RS26400 | Not Available | Negative | 4646787 - 4647437 | 25285.5 |
| mfs transporter | BE963_RS26405 | Not Available | Negative | 4647518 - 4648708 | 42922.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





