Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | BE963_RS26200 | Not Available | Negative | 4594917 - 4595579 | 23620.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | BE963_RS26205 | Not Available | Negative | 4595576 - 4596199 | 23040.6 |
| cytochrome c-type protein napc | BE963_RS26210 | Not Available | Negative | 4596212 - 4596814 | 23101.8 |
| nitrate reductase cytochrome c-type subunit | BE963_RS26215 | Not Available | Negative | 4596824 - 4597273 | 16311.5 |
| quinol dehydrogenase ferredoxin subunit naph | BE963_RS26220 | Not Available | Negative | 4597270 - 4598133 | 31820.2 |
| ferredoxin-type protein napg | BE963_RS26225 | Not Available | Negative | 4598120 - 4598815 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | BE963_RS26230 | Not Available | Negative | 4598822 - 4601308 | 93061.0 |
| chaperone napd | BE963_RS26235 | Not Available | Negative | 4601305 - 4601568 | 9497.09 |
| ferredoxin-type protein napf | BE963_RS26240 | Not Available | Negative | 4601558 - 4602052 | 18061.4 |
| hypothetical protein | BE963_RS26245 | Not Available | Positive | 4602161 - 4602325 | 6251.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





