Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c abc transporter permease yejb | BE963_RS26090 | Not Available | Positive | 4574109 - 4575203 | 40362.6 |
| abc transporter permease | BE963_RS26095 | Not Available | Positive | 4575203 - 4576228 | 38117.7 |
| microcin c abc transporter atp-binding protein yejf | BE963_RS26100 | Not Available | Positive | 4576230 - 4577819 | 58617.6 |
| yejg family protein | BE963_RS26105 | Not Available | Negative | 4577823 - 4578167 | 12525.9 |
| multidrug efflux mfs transporter bcr | BE963_RS26110 | Not Available | Negative | 4578500 - 4579690 | 43325.4 |
| 16s rrna pseudouridine(516) synthase rsua | BE963_RS26115 | Not Available | Negative | 4579718 - 4580413 | 25866.8 |
| dead/deah box helicase | BE963_RS26125 | Not Available | Positive | 4580563 - 4582323 | 66489.0 |
| 50s ribosomal protein l25 | BE963_RS26130 | Not Available | Positive | 4582448 - 4582732 | 10693.1 |
| nucleoid-associated protein yejk | BE963_RS26135 | Not Available | Negative | 4582871 - 4583878 | 37825.6 |
| yejl family protein | BE963_RS26140 | Not Available | Positive | 4584060 - 4584287 | 8288.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





