Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter atp binding protein yehx | BE963_RS25805 | Not Available | Negative | 4516716 - 4517642 | 34440.7 |
| glycine betaine abc transporter permease yehy | BE963_RS25810 | Not Available | Negative | 4517635 - 4518792 | 41212.3 |
| glycine betaine abc transporter substrate-binding protein osmf | BE963_RS25815 | Not Available | Negative | 4518799 - 4519716 | 32500.9 |
| beta-glucosidase bglx | BE963_RS25820 | Not Available | Negative | 4519865 - 4522162 | 83552.8 |
| d-lactate dehydrogenase | BE963_RS25825 | Not Available | Positive | 4522358 - 4524073 | 64615.9 |
| d-alanyl-d-alanine endopeptidase | BE963_RS25830 | Not Available | Negative | 4524111 - 4525043 | 33855.3 |
| yip1 family protein | BE963_RS25835 | Not Available | Negative | 4525217 - 4525804 | 21692.0 |
| deda family protein | BE963_RS25840 | Not Available | Positive | 4525974 - 4526552 | 21369.8 |
| sdr family oxidoreductase | BE963_RS25845 | Not Available | Negative | 4526671 - 4527432 | 26864.4 |
| multidrug resistance outer membrane protein mdtq | BE963_RS25850 | Not Available | Negative | 4527485 - 4528921 | 52236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





