Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 4301747 - 4301822 | Not Available |
| tyrosine-type recombinase/integrase | BE963_RS24885 | Not Available | Positive | 4301984 - 4303246 | 47999.3 |
| yersiniabactin biosynthesis salicylate synthase irp9/ybts | BE963_RS24890 | Not Available | Negative | 4303440 - 4304744 | 47990.4 |
| yersiniabactin-associated zinc mfs transporter ybtx | BE963_RS24895 | Not Available | Negative | 4304772 - 4306052 | 44787.4 |
| yersiniabactin abc transporter atp-binding/permease protein ybtq | BE963_RS24900 | Not Available | Negative | 4306045 - 4307847 | 66398.3 |
| yersiniabactin abc transporter atp-binding/permease protein ybtp | BE963_RS24905 | Not Available | Negative | 4307834 - 4309546 | 62873.7 |
| yersiniabactin transcriptional regulator ybta | BE963_RS24910 | Not Available | Positive | 4309803 - 4310762 | 35823.0 |
| yersiniabactin non-ribosomal peptide synthetase hmwp2 | BE963_RS24915 | Not Available | Positive | 4310953 - 4317060 | 228620.0 |
| yersiniabactin polyketide synthase hmwp1 | BE963_RS24920 | Not Available | Positive | 4317148 - 4326639 | 348888.0 |
| yersiniabactin biosynthesis oxidoreductase ybtu | BE963_RS24925 | Not Available | Positive | 4326636 - 4327736 | 40974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





