Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrc | BE963_RS24555 | Not Available | Negative | 4250569 - 4252401 | 68222.0 |
| uvry/sira/gaca family response regulator transcription factor | BE963_RS24560 | Not Available | Negative | 4252398 - 4253054 | 23864.1 |
| protein yecu | BE963_RS29295 | Not Available | Positive | 4253350 - 4253526 | 6767.46 |
| duf2594 family protein yecf | BE963_RS24565 | Not Available | Positive | 4253513 - 4253737 | 8239.04 |
| transcriptional regulator sdia | BE963_RS24570 | Not Available | Negative | 4253804 - 4254526 | 28079.8 |
| l-cystine abc transporter atp-binding protein tcyn | BE963_RS24575 | Not Available | Negative | 4254756 - 4255508 | 27677.7 |
| cystine abc transporter permease | BE963_RS24580 | Not Available | Negative | 4255505 - 4256173 | 24802.7 |
| d-cysteine desulfhydrase | BE963_RS24585 | Not Available | Negative | 4256188 - 4257174 | 35155.4 |
| cystine abc transporter substrate-binding protein | BE963_RS24590 | Not Available | Negative | 4257279 - 4258079 | 29040.8 |
| flagella biosynthesis regulatory protein fliz | BE963_RS24595 | Not Available | Negative | 4258167 - 4258718 | 21572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





