Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endonuclease cas1e | BE963_RS03455 | Not Available | Negative | 135587 - 136510 | 33410.7 |
| type i-e crispr-associated protein cas6/cse3/case | BE963_RS03460 | Not Available | Negative | 136507 - 137157 | 24777.7 |
| type i-e crispr-associated protein cas5/casd | BE963_RS03465 | Not Available | Negative | 137139 - 137885 | 28802.2 |
| type i-e crispr-associated protein cas7/cse4/casc | BE963_RS03470 | Not Available | Negative | 137896 - 138951 | 38526.7 |
| type i-e crispr-associated protein cse2/casb | BE963_RS03475 | Not Available | Negative | 138966 - 139502 | 20703.7 |
| type i-e crispr-associated protein cse1/casa | BE963_RS03480 | Not Available | Negative | 139499 - 141061 | 59163.6 |
| hypothetical protein | BE963_RS03485 | Not Available | Negative | 141159 - 143859 | 92882.9 |
| hok/gef family protein | BE963_RS03490 | Not Available | Negative | 144054 - 144206 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | BE963_RS03500 | Not Available | Negative | 144471 - 145205 | 27958.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | BE963_RS03505 | Not Available | Negative | 145281 - 146993 | 64010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





