Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | BE963_RS24290 | Not Available | Negative | 4204700 - 4205311 | 22087.0 |
| stress response small protein yobi | BE963_RS24295 | Not Available | Negative | 4205450 - 4205515 | 2665.42 |
| yebb family permuted papain-like enzyme | BE963_RS24300 | Not Available | Positive | 4205586 - 4206188 | 22741.2 |
| crossover junction endodeoxyribonuclease ruvc | BE963_RS24305 | Not Available | Negative | 4206190 - 4206711 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | BE963_RS24310 | Not Available | Negative | 4206746 - 4207486 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | BE963_RS24315 | Not Available | Negative | 4207515 - 4207967 | 17292.6 |
| aspartate--trna ligase | BE963_RS24320 | Not Available | Negative | 4208085 - 4209857 | 65873.2 |
| hydrolase | BE963_RS24325 | Not Available | Positive | 4210167 - 4210733 | 20511.4 |
| duf72 domain-containing protein | BE963_RS24330 | Not Available | Positive | 4210730 - 4211548 | 31478.8 |
| mapeg family protein | BE963_RS24335 | Not Available | Positive | 4211601 - 4211996 | 15227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





