Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sufs | BE963_RS23280 | Not Available | Negative | 4013397 - 4014617 | 44454.4 |
| fe-s cluster assembly protein sufd | BE963_RS23285 | Not Available | Negative | 4014614 - 4015885 | 46816.5 |
| fe-s cluster assembly atpase sufc | BE963_RS23290 | Not Available | Negative | 4015860 - 4016606 | 27599.1 |
| fe-s cluster assembly protein sufb | BE963_RS23295 | Not Available | Negative | 4016616 - 4018103 | 54761.1 |
| fe-s cluster assembly scaffold sufa | BE963_RS23300 | Not Available | Negative | 4018112 - 4018480 | 13286.8 |
| ydih family protein | BE963_RS23305 | Not Available | Negative | 4019029 - 4019217 | 7266.74 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | BE963_RS23310 | Not Available | Negative | 4019317 - 4019727 | 14912.2 |
| fad-binding and (fe-s)-binding domain-containing protein | BE963_RS23315 | Not Available | Negative | 4019724 - 4022780 | 113118.0 |
| ai-2e family transporter ydik | BE963_RS23325 | Not Available | Positive | 4023169 - 4024281 | 39833.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 4024467 - 4024574 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





