Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | BE963_RS23235 | Not Available | Negative | 4004436 - 4005104 | 25100.9 |
| ydhw family putative oxidoreductase system protein | BE963_RS23240 | Not Available | Negative | 4005168 - 4005806 | 24098.3 |
| aldehyde ferredoxin oxidoreductase | BE963_RS23245 | Not Available | Negative | 4005819 - 4007921 | 77866.8 |
| ferredoxin-like protein | BE963_RS23250 | Not Available | Negative | 4007942 - 4008568 | 22368.2 |
| fumarate hydratase fumd | BE963_RS23255 | Not Available | Negative | 4009026 - 4009235 | 7907.85 |
| protein ynhh | BE963_RS29855 | Not Available | Positive | 4009590 - 4009784 | 7582.04 |
| pyruvate kinase pykf | BE963_RS23260 | Not Available | Positive | 4009792 - 4011204 | 50732.5 |
| murein lipoprotein lpp | BE963_RS23265 | Not Available | Positive | 4011515 - 4011751 | 8323.95 |
| l,d-transpeptidase ldte | BE963_RS23270 | Not Available | Negative | 4011815 - 4012819 | 36042.4 |
| cysteine desulfuration protein sufe | BE963_RS23275 | Not Available | Negative | 4012968 - 4013384 | 15790.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





