Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | BE963_RS22865 | Not Available | Negative | 3930639 - 3932171 | 54642.6 |
| duf1471 family protein ydgh | BE963_RS22870 | Not Available | Positive | 3932695 - 3933639 | 33890.9 |
| amino acid permease | BE963_RS22880 | Not Available | Positive | 3933825 - 3935207 | 49504.5 |
| dihydromonapterin reductase | BE963_RS22885 | Not Available | Positive | 3935244 - 3935966 | 26423.9 |
| glpm family protein | BE963_RS22890 | Not Available | Negative | 3935963 - 3936298 | 12323.8 |
| two-component system response regulator rsta | BE963_RS22895 | Not Available | Positive | 3936427 - 3937146 | 26763.5 |
| two-component system sensor histidine kinase rstb | BE963_RS22900 | Not Available | Positive | 3937150 - 3938451 | 49299.8 |
| dna replication terminus site-binding protein | BE963_RS22905 | Not Available | Positive | 3938527 - 3939456 | 35774.1 |
| class ii fumarate hydratase | BE963_RS22910 | Not Available | Negative | 3939453 - 3940856 | 50464.8 |
| class i fumarate hydratase | BE963_RS22915 | Not Available | Negative | 3940999 - 3942645 | 60316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





