Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | BE963_RS03305 | Not Available | Positive | 109250 - 109600 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | BE963_RS03310 | Not Available | Positive | 109604 - 110476 | 31566.8 |
| hydrogenase 3 maturation protein hypc | BE963_RS03315 | Not Available | Positive | 110467 - 110739 | 9732.58 |
| hydrogenase formation protein hypd | BE963_RS03320 | Not Available | Positive | 110739 - 111860 | 41367.7 |
| hydrogenase maturation carbamoyl dehydratase hype | BE963_RS03325 | Not Available | Positive | 111857 - 112867 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | BE963_RS03330 | Not Available | Positive | 112941 - 115019 | 78415.4 |
| tobe domain-containing protein | BE963_RS03335 | Not Available | Positive | 115064 - 115492 | 14508.6 |
| nitrous oxide-stimulated promoter family protein | BE963_RS03340 | Not Available | Negative | 115531 - 115875 | 13535.7 |
| hypothetical protein | BE963_RS29095 | Not Available | Negative | 115952 - 116086 | 4934.38 |
| dna mismatch repair protein muts | BE963_RS03345 | Not Available | Positive | 116162 - 118723 | 95309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





