Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase dgcz | BE963_RS22340 | Not Available | Negative | 3848518 - 3849408 | 33881.4 |
| ydei family stress tolerance ob fold protein | BE963_RS22345 | Not Available | Negative | 3849663 - 3850055 | 14135.9 |
| hypothetical protein | BE963_RS29840 | Not Available | Positive | 3850295 - 3850375 | 2811.48 |
| peptidyl-dipeptidase dcp | BE963_RS22360 | Not Available | Negative | 3850420 - 3852465 | 77537.8 |
| helix-turn-helix domain-containing protein | BE963_RS22600 | Not Available | Negative | 3889541 - 3890254 | 26892.8 |
| ybga family protein | BE963_RS22610 | Not Available | Negative | 3890661 - 3891620 | 37040.0 |
| lipocalin family protein | BE963_RS22615 | Not Available | Positive | 3891813 - 3892337 | 19788.7 |
| starvation-sensing protein rspa | BE963_RS22740 | Not Available | Negative | 3908196 - 3909410 | 45971.0 |
| ynfa family protein | BE963_RS22750 | Not Available | Negative | 3909616 - 3909942 | 11858.1 |
| duf1283 family protein | BE963_RS22755 | Not Available | Positive | 3910077 - 3910418 | 12961.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





