Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BE963_RS22170 | Not Available | Positive | 3815303 - 3816202 | 33910.2 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | BE963_RS22175 | Not Available | Negative | 3816600 - 3817922 | 49386.8 |
| type ii toxin-antitoxin system antitoxin hipb | BE963_RS22180 | Not Available | Negative | 3817922 - 3818188 | 10047.9 |
| hypothetical protein | BE963_RS29275 | Not Available | Negative | 3818399 - 3823164 | 164457.0 |
| autoinducer-2 kinase | BE963_RS22200 | Not Available | Negative | 3823686 - 3825278 | 57562.0 |
| transcriptional regulator lsrr | BE963_RS22205 | Not Available | Negative | 3825357 - 3826310 | 33826.1 |
| autoinducer 2 abc transporter atp-binding protein lsra | BE963_RS22210 | Not Available | Positive | 3826559 - 3828094 | 55663.7 |
| autoinducer 2 abc transporter permease lsrc | BE963_RS22215 | Not Available | Positive | 3828088 - 3829116 | 36493.2 |
| autoinducer 2 abc transporter permease lsrd | BE963_RS22220 | Not Available | Positive | 3829116 - 3830108 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | BE963_RS22225 | Not Available | Positive | 3830120 - 3831142 | 36756.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





