Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid stress response transcriptional regulator ydeo | BE963_RS22075 | Not Available | Negative | 3797607 - 3798368 | 28882.1 |
| two-component system connector safa | BE963_RS22080 | Not Available | Negative | 3798443 - 3798640 | 7268.15 |
| acid resistance putative oxidoreductase ydep | BE963_RS22085 | Not Available | Negative | 3798888 - 3801167 | 83573.8 |
| fimbrial protein | BE963_RS22090 | Not Available | Negative | 3801500 - 3802414 | 32042.4 |
| fimbrial protein | BE963_RS22095 | Not Available | Negative | 3802473 - 3802976 | 18175.5 |
| fimbrial protein | BE963_RS22100 | Not Available | Negative | 3802989 - 3803519 | 18935.6 |
| fimbria/pilus outer membrane usher protein | BE963_RS22105 | Not Available | Negative | 3803533 - 3806184 | 96608.3 |
| fimbria/pilus periplasmic chaperone | BE963_RS22110 | Not Available | Negative | 3806226 - 3806936 | 26121.8 |
| type 1 fimbrial major subunit fima | BE963_RS22115 | Not Available | Negative | 3807299 - 3807862 | 19145.6 |
| hypothetical protein | BE963_RS22120 | Not Available | Negative | 3808296 - 3808562 | 10437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





