Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid/biofilm transcriptional regulator mcbr | BE963_RS21805 | Not Available | Positive | 3732693 - 3733358 | 25266.1 |
| tonb-dependent receptor pqqu | BE963_RS21810 | Not Available | Negative | 3733394 - 3735496 | 77310.0 |
| ynce family protein | BE963_RS21820 | Not Available | Positive | 3735738 - 3736799 | 38658.2 |
| l-asparagine permease | BE963_RS21825 | Not Available | Negative | 3736912 - 3738411 | 54236.2 |
| glutathione s-transferase family protein | BE963_RS21830 | Not Available | Positive | 3738678 - 3739295 | 23387.2 |
| type vi secretion system paar protein | BE963_RS21835 | Not Available | Positive | 3739835 - 3740119 | 9559.37 |
| type vi secretion system tip protein tssi/vgrg | BE963_RS21840 | Not Available | Positive | 3740138 - 3742543 | 89473.1 |
| peptidase m35 | BE963_RS21845 | Not Available | Positive | 3742533 - 3743324 | 30578.4 |
| hypothetical protein | BE963_RS21850 | Not Available | Positive | 3743348 - 3744133 | 30505.1 |
| hypothetical protein | BE963_RS21855 | Not Available | Positive | 3744224 - 3744676 | 17282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





