Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3313 domain-containing protein | BE963_RS21695 | Not Available | Positive | 3715299 - 3715967 | 24353.2 |
| bene family transporter ydco | BE963_RS21700 | Not Available | Negative | 3716002 - 3717213 | 42129.8 |
| dna-binding transcriptional regulator sutr | BE963_RS21705 | Not Available | Positive | 3717266 - 3717802 | 19698.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | BE963_RS21710 | Not Available | Positive | 3717875 - 3719836 | 72810.1 |
| yncj family protein | BE963_RS21715 | Not Available | Negative | 3719928 - 3720158 | 8741.39 |
| type ii toxin-antitoxin system mrna interferase toxin hica | BE963_RS21720 | Not Available | Positive | 3720380 - 3720556 | 6779.29 |
| type ii toxin-antitoxin system antitoxin hicb | BE963_RS21725 | Not Available | Positive | 3720602 - 3721018 | 15233.5 |
| plp-dependent aminotransferase family protein | BE963_RS21730 | Not Available | Positive | 3721097 - 3722503 | 52771.8 |
| putative abc transporter substrate-binding protein ydcs | BE963_RS21735 | Not Available | Positive | 3722748 - 3723893 | 42367.4 |
| abc transporter atp-binding protein | BE963_RS21740 | Not Available | Positive | 3723911 - 3724924 | 37093.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





