Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycin family protein | BE963_RS20740 | Not Available | Negative | 3540477 - 3540728 | 9386.17 |
| type i dna topoisomerase | BE963_RS20750 | Not Available | Positive | 3541108 - 3543705 | 97342.0 |
| hth-type transcriptional regulator cysb | BE963_RS20760 | Not Available | Positive | 3543915 - 3544889 | 36152.5 |
| ymia family putative membrane protein | BE963_RS20765 | Not Available | Positive | 3545208 - 3545348 | 5337.71 |
| protein ycix | BE963_RS20770 | Not Available | Positive | 3545351 - 3545518 | 6334.21 |
| small membrane protein ymic | BE963_RS29245 | Not Available | Positive | 3545632 - 3545727 | 3822.77 |
| aconitate hydratase acna | BE963_RS20780 | Not Available | Positive | 3545891 - 3548566 | 97884.0 |
| gtp cyclohydrolase ii | BE963_RS20785 | Not Available | Negative | 3548630 - 3549220 | 21837.3 |
| phosphatidylglycerophosphatase b | BE963_RS20790 | Not Available | Positive | 3549390 - 3550154 | 28992.8 |
| lipopolysaccharide assembly protein lapa | BE963_RS20795 | Not Available | Positive | 3550303 - 3550611 | 11324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





