Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycic family protein | BE963_RS20225 | Not Available | Negative | 3467612 - 3468355 | 26406.5 |
| hypothetical protein | BE963_RS28780 | Not Available | Negative | 3468383 - 3468472 | 3293.04 |
| outer membrane protein ompw | BE963_RS20230 | Not Available | Positive | 3468712 - 3469350 | 22924.2 |
| hypothetical protein | BE963_RS20655 | Not Available | Positive | 3524593 - 3524718 | 4811.66 |
| ferritin-like domain-containing protein | BE963_RS20660 | Not Available | Negative | 3524778 - 3525284 | 18997.6 |
| ferritin-like domain-containing protein | BE963_RS20665 | Not Available | Negative | 3525330 - 3525830 | 18584.2 |
| general stress protein | BE963_RS20670 | Not Available | Negative | 3525916 - 3526095 | 6002.69 |
| tryptophan synthase subunit alpha | BE963_RS20675 | Not Available | Negative | 3526476 - 3527282 | 28698.7 |
| tryptophan synthase subunit beta | BE963_RS20680 | Not Available | Negative | 3527282 - 3528475 | 43000.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | BE963_RS20685 | Not Available | Negative | 3528487 - 3529848 | 49386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





