Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhal | BE963_RS19900 | Not Available | Negative | 3406569 - 3407201 | 22605.0 |
| dihydroxyacetone kinase subunit dhak | BE963_RS19905 | Not Available | Negative | 3407212 - 3408282 | 38234.3 |
| dihydroxyacetone kinase operon transcriptional regulator dhar | BE963_RS19910 | Not Available | Positive | 3408510 - 3410429 | 70497.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | BE963_RS19915 | Not Available | Negative | 3410529 - 3413414 | 100399.0 |
| redox-regulated atpase ychf | BE963_RS19930 | Not Available | Negative | 3414260 - 3415351 | 39611.5 |
| aminoacyl-trna hydrolase | BE963_RS19935 | Not Available | Negative | 3415468 - 3416052 | 21099.6 |
| stress-induced protein ychh | BE963_RS19940 | Not Available | Positive | 3416330 - 3416608 | 10486.9 |
| c4-dicarboxylic acid transporter daua | BE963_RS19945 | Not Available | Negative | 3416663 - 3418342 | 59466.9 |
| ribose-phosphate diphosphokinase | BE963_RS19950 | Not Available | Negative | 3418467 - 3419414 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BE963_RS19955 | Not Available | Negative | 3419565 - 3420416 | 30981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





