Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonic semialdehyde reductase | BE963_RS18850 | Not Available | Negative | 3222408 - 3222998 | 21644.6 |
| pyrimidine utilization protein d | BE963_RS18855 | Not Available | Negative | 3222995 - 3223807 | 29390.5 |
| 3-aminoacrylate deaminase | BE963_RS18860 | Not Available | Negative | 3223815 - 3224201 | 13791.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | BE963_RS18865 | Not Available | Negative | 3224213 - 3224905 | 25184.0 |
| pyrimidine utilization protein a | BE963_RS18870 | Not Available | Negative | 3224905 - 3225996 | 40001.6 |
| hth-type transcriptional regulator rutr | BE963_RS18875 | Not Available | Positive | 3226284 - 3226922 | 23688.9 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | BE963_RS18880 | Not Available | Negative | 3226962 - 3230924 | 143729.0 |
| hypothetical protein | BE963_RS18885 | Not Available | Positive | 3230979 - 3231188 | 7734.87 |
| sodium/proline symporter putp | BE963_RS18895 | Not Available | Positive | 3231348 - 3232856 | 54294.3 |
| hypothetical protein | BE963_RS18900 | Not Available | Negative | 3233004 - 3234347 | 50454.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





