Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase large subunit | BE963_RS18695 | Not Available | Positive | 3194580 - 3196373 | 66287.1 |
| ni/fe-hydrogenase b-type cytochrome subunit | BE963_RS18700 | Not Available | Positive | 3196392 - 3197099 | 27612.9 |
| hydrogenase 1 maturation protease | BE963_RS18705 | Not Available | Positive | 3197096 - 3197683 | 21597.8 |
| hydrogenase-1 operon protein hyae | BE963_RS18710 | Not Available | Positive | 3197680 - 3198078 | 14874.6 |
| hydrogenase expression/formation protein | BE963_RS18715 | Not Available | Positive | 3198075 - 3198932 | 31349.5 |
| cytochrome bd-ii oxidase subunit 1 | BE963_RS18720 | Not Available | Positive | 3199066 - 3200610 | 58056.4 |
| cytochrome d ubiquinol oxidase subunit ii | BE963_RS18725 | Not Available | Positive | 3200622 - 3201758 | 42398.3 |
| cytochrome bd-ii oxidase subunit cbdx | BE963_RS18730 | Not Available | Positive | 3201771 - 3201863 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | BE963_RS18735 | Not Available | Positive | 3201943 - 3203253 | 47520.0 |
| cold shock-like protein csph | BE963_RS18740 | Not Available | Negative | 3203241 - 3203453 | 7720.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





