Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crosslink repair dna glycosylase ycaq | BE963_RS18435 | Not Available | Positive | 3137727 - 3138959 | 47667.6 |
| protein ycar | BE963_RS18440 | Not Available | Positive | 3139011 - 3139193 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | BE963_RS18445 | Not Available | Positive | 3139190 - 3139936 | 27615.1 |
| ycbj family phosphotransferase | BE963_RS18450 | Not Available | Positive | 3140090 - 3140983 | 34501.6 |
| envelope biogenesis factor elyc | BE963_RS18455 | Not Available | Negative | 3140960 - 3141739 | 28668.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | BE963_RS18460 | Not Available | Positive | 3141875 - 3142660 | 29816.0 |
| chromosome partition protein mukf | BE963_RS18465 | Not Available | Positive | 3142657 - 3143979 | 50581.7 |
| chromosome partition protein muke | BE963_RS18470 | Not Available | Positive | 3143960 - 3144664 | 26949.0 |
| chromosome partition protein mukb | BE963_RS18475 | Not Available | Positive | 3144664 - 3149124 | 170168.0 |
| l,d-transpeptidase | BE963_RS18480 | Not Available | Positive | 3149385 - 3151232 | 67858.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





