Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | BE963_RS02990 | Not Available | Positive | 53676 - 53975 | 10596.9 |
| thiosulfate sulfurtransferase ygap | BE963_RS02995 | Not Available | Positive | 53985 - 54509 | 18684.9 |
| dna-binding protein stpa | BE963_RS03000 | Not Available | Negative | 54556 - 54960 | 15348.4 |
| l-alanine exporter alae | BE963_RS03005 | Not Available | Positive | 55628 - 56077 | 16934.1 |
| duf2002 family protein | BE963_RS03010 | Not Available | Negative | 56114 - 56458 | 13066.5 |
| duf883 domain-containing protein | BE963_RS03015 | Not Available | Positive | 56610 - 56939 | 11847.9 |
| plp-dependent aminotransferase family protein | BE963_RS03020 | Not Available | Negative | 57017 - 58330 | 49043.2 |
| carboxymuconolactone decarboxylase family protein | BE963_RS03025 | Not Available | Positive | 58418 - 58849 | 16175.4 |
| glutaredoxin-like protein nrdh | BE963_RS03035 | Not Available | Positive | 59058 - 59303 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | BE963_RS03040 | Not Available | Positive | 59300 - 59707 | 15256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





