Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virk/ybjx family protein | BE963_RS18235 | Not Available | Negative | 3087521 - 3088477 | 36951.0 |
| macrolide transporter subunit maca | BE963_RS18240 | Not Available | Positive | 3088628 - 3089743 | 40651.3 |
| macrolide abc transporter atp-binding protein/permease macb | BE963_RS18245 | Not Available | Positive | 3089740 - 3091686 | 70648.7 |
| cold shock-like protein cspd | BE963_RS18250 | Not Available | Negative | 3091758 - 3091982 | 7969.41 |
| protein yljb | BE963_RS29560 | Not Available | Positive | 3092132 - 3092206 | 2707.06 |
| atp-dependent clp protease adapter clps | BE963_RS18255 | Not Available | Positive | 3092305 - 3092625 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | BE963_RS18260 | Not Available | Positive | 3092656 - 3094932 | 84211.9 |
| hypothetical protein | BE963_RS18265 | Not Available | Negative | 3095050 - 3095448 | 15376.5 |
| Trna-ser | Not Available | Not Available | Positive | 3095573 - 3095660 | Not Available |
| translation initiation factor if-1 | BE963_RS18275 | Not Available | Negative | 3095914 - 3096132 | 8250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





