Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ybjm | BE963_RS18065 | Not Available | Positive | 3057226 - 3057603 | 14204.0 |
| glutaredoxin 1 | BE963_RS18070 | Not Available | Negative | 3057633 - 3057890 | 9695.39 |
| duf1418 family protein | BE963_RS18075 | Not Available | Positive | 3058050 - 3058337 | 10601.5 |
| nitroreductase nfsa | BE963_RS18080 | Not Available | Positive | 3058321 - 3059043 | 26893.1 |
| 30s ribosomal protein s6--l-glutamate ligase | BE963_RS18085 | Not Available | Positive | 3059104 - 3060006 | 32438.5 |
| ybjn domain-containing protein | BE963_RS18090 | Not Available | Positive | 3060094 - 3060570 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BE963_RS18100 | Not Available | Positive | 3060921 - 3062033 | 40885.7 |
| putrescine abc transporter atp-binding subunit potg | BE963_RS18105 | Not Available | Positive | 3062128 - 3063261 | 41981.4 |
| putrescine abc transporter permease poth | BE963_RS18110 | Not Available | Positive | 3063271 - 3064224 | 35457.6 |
| putrescine abc transporter permease poti | BE963_RS18115 | Not Available | Positive | 3064221 - 3065066 | 30519.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





