Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 42201 - 42276 | Not Available |
| alpha-amylase family glycosyl hydrolase | BE963_RS02945 | Not Available | Positive | 42836 - 45088 | 85054.0 |
| glutarate dioxygenase glah | BE963_RS02950 | Not Available | Positive | 45424 - 46401 | 37397.6 |
| l-2-hydroxyglutarate oxidase | BE963_RS02955 | Not Available | Positive | 46421 - 47689 | 46083.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase | BE963_RS02960 | Not Available | Positive | 47712 - 49160 | 51743.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | BE963_RS02965 | Not Available | Positive | 49174 - 50454 | 45693.2 |
| gaba permease | BE963_RS02970 | Not Available | Positive | 50718 - 52118 | 51083.1 |
| dna-binding transcriptional regulator csir | BE963_RS02975 | Not Available | Positive | 52139 - 52801 | 24992.3 |
| potassium binding protein kbp | BE963_RS02980 | Not Available | Negative | 52802 - 53251 | 16033.9 |
| yqae/pmp3 family membrane protein | BE963_RS02985 | Not Available | Negative | 53335 - 53493 | 5865.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





