Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | BE963_RS17220 | Not Available | Positive | 2893704 - 2895122 | 53659.7 |
| dipeptide permease dtpd | BE963_RS17225 | Not Available | Negative | 2895164 - 2896645 | 54134.1 |
| radiation resistance protein ybgi | BE963_RS17230 | Not Available | Positive | 2896916 - 2897659 | 26894.0 |
| 5-oxoprolinase subunit pxpb | BE963_RS17235 | Not Available | Positive | 2897682 - 2898338 | 23948.0 |
| 5-oxoprolinase subunit pxpc | BE963_RS17240 | Not Available | Positive | 2898332 - 2899264 | 34466.6 |
| 5-oxoprolinase subunit pxpa | BE963_RS17245 | Not Available | Positive | 2899254 - 2899988 | 25833.9 |
| endonuclease viii | BE963_RS17250 | Not Available | Positive | 2900024 - 2900815 | 29781.7 |
| abrb family transcriptional regulator | BE963_RS17255 | Not Available | Negative | 2900812 - 2901858 | 36897.1 |
| fimbrial protein | BE963_RS17260 | Not Available | Negative | 2902010 - 2903071 | 39565.8 |
| molecular chaperone | BE963_RS17265 | Not Available | Negative | 2903068 - 2903799 | 27248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





