Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | BE963_RS16410 | Not Available | Negative | 2735418 - 2736284 | 30987.6 |
| type 1 fimbrial major subunit fima | BE963_RS16415 | Not Available | Positive | 2736755 - 2737297 | 18475.5 |
| type 1 fimbria chaperone fimc | BE963_RS16420 | Not Available | Positive | 2737517 - 2738209 | 25459.1 |
| fimbrial biogenesis usher protein | BE963_RS16425 | Not Available | Positive | 2738240 - 2740849 | 96071.8 |
| type 1 fimbria d-mannose specific adhesin fimh | BE963_RS16430 | Not Available | Positive | 2740862 - 2741869 | 36591.1 |
| fimbria assembly protein | BE963_RS16435 | Not Available | Positive | 2741880 - 2742395 | 18153.5 |
| fimbria biosynthesis transcriptional regulator fimz | BE963_RS16440 | Not Available | Negative | 2742398 - 2743030 | 23691.9 |
| Trna-arg | Not Available | Not Available | Positive | 2743273 - 2743349 | Not Available |
| dna-binding transcriptional regulator envy | BE963_RS16455 | Not Available | Negative | 2743403 - 2744155 | 28575.9 |
| duf4434 family protein | BE963_RS16465 | Not Available | Negative | 2744338 - 2745228 | 33016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





