Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | BE963_RS16300 | Not Available | Positive | 2714418 - 2715194 | 29357.0 |
| 2-hydroxy-3-oxopropionate reductase | BE963_RS16305 | Not Available | Positive | 2715294 - 2716172 | 30802.5 |
| allantoin transporter | BE963_RS16315 | Not Available | Positive | 2716341 - 2717795 | 52349.1 |
| allantoinase allb | BE963_RS16320 | Not Available | Positive | 2717856 - 2719217 | 49632.5 |
| uracil/xanthine transporter | BE963_RS16325 | Not Available | Positive | 2719274 - 2720575 | 47242.2 |
| glycerate 3-kinase | BE963_RS16330 | Not Available | Positive | 2720597 - 2721742 | 38887.1 |
| (s)-ureidoglycine aminohydrolase | BE963_RS16335 | Not Available | Negative | 2721872 - 2722657 | 28692.0 |
| allantoate deiminase | BE963_RS16340 | Not Available | Negative | 2722668 - 2723903 | 45671.6 |
| ureidoglycolate dehydrogenase | BE963_RS16345 | Not Available | Negative | 2723925 - 2724974 | 37898.3 |
| acyl-coa synthetase fdra | BE963_RS16350 | Not Available | Positive | 2725291 - 2726958 | 58483.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





