Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lutb/lldf family l-lactate oxidation iron-sulfur protein | BE963_RS15225 | Not Available | Positive | 2475711 - 2477138 | 53005.9 |
| lutc/ykgg family protein | BE963_RS15230 | Not Available | Positive | 2477131 - 2477826 | 25141.0 |
| protein ykgh | BE963_RS15245 | Not Available | Negative | 2478069 - 2478737 | 25454.0 |
| choline dehydrogenase | BE963_RS15250 | Not Available | Negative | 2478948 - 2480618 | 61860.1 |
| betaine-aldehyde dehydrogenase | BE963_RS15255 | Not Available | Negative | 2480632 - 2482104 | 52982.3 |
| transcriptional regulator beti | BE963_RS15260 | Not Available | Negative | 2482118 - 2482705 | 21857.4 |
| choline bcct transporter bett | BE963_RS15270 | Not Available | Positive | 2482834 - 2484867 | 75846.5 |
| dna-binding transcriptional activator/c-di-gmp phosphodiesterase pdel | BE963_RS15280 | Not Available | Positive | 2485745 - 2486833 | 40740.3 |
| lysr substrate-binding domain-containing protein | BE963_RS15285 | Not Available | Negative | 2486875 - 2487807 | 34758.9 |
| duf1097 domain-containing protein | BE963_RS15290 | Not Available | Negative | 2487899 - 2488396 | 17241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





