Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | BE963_RS14695 | Not Available | Negative | 2362229 - 2362708 | 17623.9 |
| vasl domain-containing protein | BE963_RS14700 | Not Available | Negative | 2362726 - 2364084 | 51570.2 |
| type vi secretion system membrane subunit tssm | BE963_RS14705 | Not Available | Negative | 2364095 - 2367532 | 131066.0 |
| type vi secretion system protein tssa | BE963_RS14710 | Not Available | Negative | 2367642 - 2369084 | 53725.9 |
| type vi secretion system-associated protein vasi | BE963_RS14715 | Not Available | Negative | 2369089 - 2369832 | 26476.8 |
| type vi secretion system atpase tssh | BE963_RS14720 | Not Available | Negative | 2369829 - 2372561 | 99573.7 |
| type ivb secretion system protein icmh/dotu | BE963_RS14725 | Not Available | Negative | 2372571 - 2373302 | 28206.4 |
| type vi secretion system baseplate subunit tssk | BE963_RS14730 | Not Available | Negative | 2373349 - 2374695 | 49863.2 |
| type vi secretion system lipoprotein tssj | BE963_RS14735 | Not Available | Negative | 2374698 - 2375222 | 19267.9 |
| type vi secretion system-associated fha domain protein tagh | BE963_RS14740 | Not Available | Negative | 2375219 - 2376499 | 47259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





