Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | BE963_RS13870 | Not Available | Negative | 2189020 - 2191371 | 89991.6 |
| l-ribulose-5-phosphate 4-epimerase | BE963_RS13875 | Not Available | Negative | 2191446 - 2192141 | 25499.4 |
| l-arabinose isomerase | BE963_RS13880 | Not Available | Negative | 2192256 - 2193758 | 56134.2 |
| ribulokinase | BE963_RS13885 | Not Available | Negative | 2193769 - 2195469 | 61215.8 |
| arabinose operon transcriptional regulator arac | BE963_RS13895 | Not Available | Positive | 2195808 - 2196686 | 33385.8 |
| deda family protein | BE963_RS13900 | Not Available | Positive | 2196772 - 2197536 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | BE963_RS13905 | Not Available | Negative | 2197617 - 2198315 | 25067.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | BE963_RS13910 | Not Available | Negative | 2198299 - 2199909 | 59373.5 |
| thiamine abc transporter substrate binding subunit | BE963_RS13915 | Not Available | Negative | 2199885 - 2200868 | 36243.2 |
| t3ss effector espy2 | BE963_RS13920 | Not Available | Positive | 2201239 - 2201808 | 21638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





