Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr efflux pump acrab transcriptional activator roba | BE963_RS13510 | Not Available | Negative | 2113022 - 2113891 | 33146.8 |
| protein crea | BE963_RS13515 | Not Available | Positive | 2114102 - 2114575 | 17108.8 |
| two-component system response regulator creb | BE963_RS13520 | Not Available | Positive | 2114588 - 2115277 | 26156.8 |
| two-component system sensor histidine kinase crec | BE963_RS13525 | Not Available | Positive | 2115277 - 2116701 | 52223.4 |
| cell envelope integrity protein cred | BE963_RS13530 | Not Available | Positive | 2116759 - 2118111 | 49917.8 |
| two-component system response regulator arca | BE963_RS13535 | Not Available | Negative | 2118171 - 2118887 | 27293.6 |
| protein yjjy | BE963_RS13540 | Not Available | Positive | 2118983 - 2119123 | 4886.09 |
| trna/rrna methyltransferase | BE963_RS13545 | Not Available | Positive | 2119523 - 2120209 | 25332.6 |
| thr operon leader peptide | BE963_RS13550 | Not Available | Positive | 2120423 - 2120488 | 2138.61 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | BE963_RS13555 | Not Available | Positive | 2120569 - 2123031 | 89084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





