Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial usher fimd | BE963_RS13100 | Not Available | Positive | 2038465 - 2041101 | 96504.8 |
| type 1 fimbria minor subunit fimf | BE963_RS13105 | Not Available | Positive | 2041111 - 2041641 | 18700.3 |
| fimbrial protein | BE963_RS13110 | Not Available | Positive | 2041714 - 2042157 | 15173.5 |
| type 1 fimbria d-mannose specific adhesin fimh | BE963_RS13115 | Not Available | Positive | 2042177 - 2043079 | 31502.2 |
| gluconate permease gntp | BE963_RS13120 | Not Available | Negative | 2043252 - 2044595 | 47141.0 |
| mannonate dehydratase | BE963_RS13130 | Not Available | Positive | 2044935 - 2046119 | 44826.5 |
| fructuronate reductase | BE963_RS13135 | Not Available | Positive | 2046200 - 2047660 | 53659.3 |
| uxu operon transcriptional regulator | BE963_RS13145 | Not Available | Positive | 2047875 - 2048648 | 29309.9 |
| duf2686 family protein | BE963_RS13150 | Not Available | Negative | 2048789 - 2049619 | 30721.7 |
| protein ytid | BE963_RS29940 | Not Available | Positive | 2049953 - 2050096 | 5485.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





