Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase hera-like c-terminal domain-containing protein | BE963_RS12580 | Not Available | Negative | 1938229 - 1939731 | 54335.5 |
| dna-binding transcriptional regulator idnr | BE963_RS12585 | Not Available | Negative | 1939809 - 1940807 | 37569.5 |
| gnt-ii system l-idonate transporter | BE963_RS12590 | Not Available | Negative | 1940874 - 1942193 | 46086.3 |
| gluconate 5-dehydrogenase | BE963_RS12595 | Not Available | Negative | 1942256 - 1943020 | 27564.3 |
| l-idonate 5-dehydrogenase | BE963_RS12600 | Not Available | Negative | 1943044 - 1944075 | 37148.7 |
| gluconokinase | BE963_RS12610 | Not Available | Positive | 1944292 - 1944855 | 21005.2 |
| nadph-dependent aldehyde reductase ahr | BE963_RS12615 | Not Available | Negative | 1944859 - 1945878 | 36519.9 |
| Trna-leu | Not Available | Not Available | Positive | 1946074 - 1946158 | Not Available |
| tyrosine-type recombinase/integrase | BE963_RS12630 | Not Available | Positive | 1946401 - 1947609 | 46133.6 |
| hypothetical protein | BE963_RS12635 | Not Available | Negative | 1947926 - 1949106 | 44290.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





