Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | BE963_RS12535 | Not Available | Negative | 1926880 - 1927884 | 36865.1 |
| ribonuclease e inhibitor rrab | BE963_RS12540 | Not Available | Positive | 1928046 - 1928462 | 15603.5 |
| gnat family n-acetyltransferase | BE963_RS12545 | Not Available | Negative | 1928508 - 1929011 | 18576.4 |
| yjgn family protein | BE963_RS12550 | Not Available | Positive | 1929204 - 1930400 | 44898.1 |
| valine--trna ligase | BE963_RS12555 | Not Available | Negative | 1930456 - 1933311 | 108154.0 |
| dna polymerase iii subunit chi | BE963_RS12560 | Not Available | Negative | 1933311 - 1933754 | 16588.5 |
| leucyl aminopeptidase | BE963_RS12565 | Not Available | Negative | 1934108 - 1935619 | 54883.1 |
| protein ytga | BE963_RS29540 | Not Available | Positive | 1935773 - 1935823 | 1763.19 |
| lps export abc transporter permease lptf | BE963_RS12570 | Not Available | Positive | 1935886 - 1936986 | 40360.1 |
| lps export abc transporter permease lptg | BE963_RS12575 | Not Available | Positive | 1936986 - 1938068 | 39621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





