Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin chps | BE963_RS12380 | Not Available | Positive | 1897516 - 1897767 | 9332.18 |
| endoribonuclease toxin chpb | BE963_RS12385 | Not Available | Positive | 1897761 - 1898111 | 12454.2 |
| inorganic diphosphatase | BE963_RS12390 | Not Available | Negative | 1898190 - 1898720 | 19704.6 |
| galactofuranose abc transporter substrate-binding protein ytfq | BE963_RS12395 | Not Available | Positive | 1899030 - 1899986 | 34314.5 |
| galactofuranose abc transporter, atp-binding protein ytfr | BE963_RS12400 | Not Available | Positive | 1900126 - 1901628 | 55305.5 |
| galactofuranose abc transporter, atp-binding protein ytft | BE963_RS12405 | Not Available | Positive | 1901642 - 1902664 | 35490.0 |
| galactofuranose abc transporter, permease protein yjff | BE963_RS12410 | Not Available | Positive | 1902651 - 1903646 | 35009.9 |
| class 1 fructose-bisphosphatase | BE963_RS12415 | Not Available | Negative | 1903679 - 1904677 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | BE963_RS12420 | Not Available | Positive | 1904853 - 1906226 | 49896.1 |
| ribosome biogenesis factor yjga | BE963_RS12425 | Not Available | Negative | 1906309 - 1906860 | 21360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





